Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sros_2942 | Sros_2943 | Sros_2942 | Sros_2943 | KEGG: gbm:Gbem_0575 DoxX family protein. | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | 0.843 |
Sros_2942 | Sros_2945 | Sros_2942 | Sros_2945 | KEGG: gbm:Gbem_0575 DoxX family protein. | KEGG: tbd:Tbd_0236 hypothetical protein. | 0.686 |
Sros_2942 | Sros_2946 | Sros_2942 | Sros_2946 | KEGG: gbm:Gbem_0575 DoxX family protein. | Hypothetical protein. | 0.689 |
Sros_2942 | Sros_2947 | Sros_2942 | Sros_2947 | KEGG: gbm:Gbem_0575 DoxX family protein. | Hypothetical protein. | 0.437 |
Sros_2942 | Sros_7756 | Sros_2942 | Sros_7756 | KEGG: gbm:Gbem_0575 DoxX family protein. | Hypothetical protein. | 0.543 |
Sros_2942 | lgt | Sros_2942 | Sros_2944 | KEGG: gbm:Gbem_0575 DoxX family protein. | Prolipoprotein diacylglyceryltransferase-like protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.724 |
Sros_2942 | trpA | Sros_2942 | Sros_2941 | KEGG: gbm:Gbem_0575 DoxX family protein. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.589 |
Sros_2943 | Sros_2942 | Sros_2943 | Sros_2942 | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | KEGG: gbm:Gbem_0575 DoxX family protein. | 0.843 |
Sros_2943 | Sros_2945 | Sros_2943 | Sros_2945 | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | KEGG: tbd:Tbd_0236 hypothetical protein. | 0.708 |
Sros_2943 | Sros_2946 | Sros_2943 | Sros_2946 | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | Hypothetical protein. | 0.707 |
Sros_2943 | Sros_2947 | Sros_2943 | Sros_2947 | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | Hypothetical protein. | 0.438 |
Sros_2943 | lgt | Sros_2943 | Sros_2944 | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | Prolipoprotein diacylglyceryltransferase-like protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.720 |
Sros_2945 | Sros_2942 | Sros_2945 | Sros_2942 | KEGG: tbd:Tbd_0236 hypothetical protein. | KEGG: gbm:Gbem_0575 DoxX family protein. | 0.686 |
Sros_2945 | Sros_2943 | Sros_2945 | Sros_2943 | KEGG: tbd:Tbd_0236 hypothetical protein. | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | 0.708 |
Sros_2945 | Sros_2946 | Sros_2945 | Sros_2946 | KEGG: tbd:Tbd_0236 hypothetical protein. | Hypothetical protein. | 0.778 |
Sros_2945 | Sros_2947 | Sros_2945 | Sros_2947 | KEGG: tbd:Tbd_0236 hypothetical protein. | Hypothetical protein. | 0.487 |
Sros_2945 | lgt | Sros_2945 | Sros_2944 | KEGG: tbd:Tbd_0236 hypothetical protein. | Prolipoprotein diacylglyceryltransferase-like protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.836 |
Sros_2946 | Sros_2942 | Sros_2946 | Sros_2942 | Hypothetical protein. | KEGG: gbm:Gbem_0575 DoxX family protein. | 0.689 |
Sros_2946 | Sros_2943 | Sros_2946 | Sros_2943 | Hypothetical protein. | Hypothetical protein; KEGG: ank:AnaeK_4060 DsbA oxidoreductase. | 0.707 |
Sros_2946 | Sros_2945 | Sros_2946 | Sros_2945 | Hypothetical protein. | KEGG: tbd:Tbd_0236 hypothetical protein. | 0.778 |
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