STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2986KEGG: reu:Reut_A0933 transmembrane protein. (196 aa)    
Predicted Functional Partners:
Sros_2985
Hypothetical protein.
       0.588
Sros_2669
KEGG: gur:Gura_1493 aminotransferase, class V.
  
  
 0.555
Sros_8110
Cysteine desulfurase; KEGG: rru:Rru_A1068 aminotransferase, class V.
  
  
 0.555
Sros_8687
Cysteine desulfurase; KEGG: afw:Anae109_1098 aminotransferase class V.
  
  
 0.555
Sros_5982
KEGG: bha:BH3468 nitrogen fixation protein.
  
  
 0.504
Sros_2987
KEGG: ade:Adeh_0026 hypothetical protein.
       0.458
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.