STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3003KEGG: scl:sce5225 protein kinase. (792 aa)    
Predicted Functional Partners:
Sros_1211
KEGG: afw:Anae109_1735 SARP family transcriptional regulator.
    0.840
Sros_3384
Transcriptional regulator, SARP family; KEGG: GK11758 gene product from transcript GK11758- RA.
 
  
 0.595
Sros_1461
Transcriptional regulator, SARP family; KEGG: scl:sce3550 hypothetical protein.
 
    0.590
Sros_8509
KEGG: scl:sce6896 protein kinase.
 
      0.545
Sros_3432
Transcriptional regulator, SARP family; KEGG: rle:RL1847 transcriptional regulator.
 
    0.468
Sros_4285
ATPase-like protein; KEGG: sus:Acid_5780 serine/threonine protein kinase.
 
    0.437
Sros_5783
Transcriptional regulator, SARP family; KEGG: scl:sce5225 protein kinase.
 
    0.432
Sros_4798
KEGG: sus:Acid_3693 serine/threonine protein kinase.
 
      0.430
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.