STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3023Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; KEGG: dvl:Dvul_1818 hypothetical protein. (338 aa)    
Predicted Functional Partners:
Sros_3024
Phospholipid/cholesterol/gamma-HCH transport system permease protein; KEGG: nis:NIS_1059 ABC transporter, permease.
 
 0.999
Sros_3025
Phospholipid/cholesterol/gamma-HCH transport system permease protein; KEGG: dvl:Dvul_1816 hypothetical protein.
 
 0.999
Sros_1074
ABC-type transport system involved in resistance to organic solvents ATPase component-like protein; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
 
 0.997
Sros_3021
Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; KEGG: gsu:GSU1899 virulence factor Mce family protein.
 
  
0.935
Sros_3022
Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
  
0.934
Sros_3018
Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
  
0.878
Sros_3020
Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; KEGG: msl:Msil_2805 mammalian cell entry related domain protein.
 
  
0.865
Sros_3019
Phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein; KEGG: nis:NIS_1335 hypothetical protein.
 
  
0.840
Sros_0805
Hypothetical protein; KEGG: bid:Bind_1545 thymidylate synthase.
  
     0.747
Sros_6829
KEGG: afr:AFE_2323 hypothetical protein.
  
     0.744
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.