STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3074KEGG: cvi:CV_0261 sugar ABC transporter permease protein. (307 aa)    
Predicted Functional Partners:
Sros_3073
KEGG: cvi:CV_0260 sugar ABC transporter permease.
 0.992
Sros_3075
KEGG: cvi:CV_2897 sugar ABC transporter periplasmic sugar-binding protein.
 
 0.973
Sros_5004
KEGG: cvi:CV_0260 sugar ABC transporter permease.
 0.968
Sros_5003
KEGG: cvi:CV_0261 sugar ABC transporter permease protein.
  
  
 
0.917
Sros_6516
KEGG: ret:RHE_PE00356 sugar ABC transporter, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.881
Sros_3490
KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.875
Sros_3840
KEGG: mlo:mlr2246 permease protein of sugar ABC transporter.
 
 0.871
Sros_2192
KEGG: mxa:MXAN_5379 putative sugar ABC transporter, permease protein.
 
 0.870
Sros_6193
KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component.
 
 0.868
Sros_3341
KEGG: mxa:MXAN_5379 putative sugar ABC transporter, permease protein.
 
 0.866
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.