STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3078Hypothetical protein; KEGG: sal:Sala_0307 amidohydrolase 2. (253 aa)    
Predicted Functional Partners:
Sros_3079
Metal-dependent hydrolase of the TIM-barrel fold- like protein; KEGG: bph:Bphy_6909 amidohydrolase 2.
     
0.886
Sros_3076
Dehydrogenase-like protein; KEGG: vei:Veis_1396 oxidoreductase domain- containing protein.
  
    0.783
Sros_3075
KEGG: cvi:CV_2897 sugar ABC transporter periplasmic sugar-binding protein.
       0.773
Sros_3077
Hypothetical protein; KEGG: sus:Acid_0038 heparinase II/III family protein.
       0.773
Sros_3080
KEGG: hypothetical protein.
       0.608
Sros_3073
KEGG: cvi:CV_0260 sugar ABC transporter permease.
       0.436
Sros_3074
KEGG: cvi:CV_0261 sugar ABC transporter permease protein.
       0.436
Sros_3072
Hypothetical protein.
       0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.