STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3170Peptidase M24; KEGG: jan:Jann_4124 peptidase M24. (391 aa)    
Predicted Functional Partners:
Sros_3171
KEGG: scl:sce0097 proline iminopeptidase.
 
 
 
 0.935
Sros_3166
KEGG: smd:Smed_3733 membrane dipeptidase.
 
  
 0.900
Sros_3174
KEGG: smd:Smed_3733 membrane dipeptidase.
 
  
 0.873
Sros_3169
KEGG: dac:Daci_5669 binding-protein-dependent transport systems inner membrane component.
 
  
 0.869
Sros_3168
KEGG: xau:Xaut_2762 binding-protein-dependent transport systems inner membrane component.
 
   
 0.832
Sros_3167
ABC-type dipeptide transport system periplasmic component-like protein; KEGG: dvm:DvMF_0788 extracellular solute-binding protein family 5.
 
     0.823
Sros_3172
KEGG: rpc:RPC_2969 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.
 
  
 0.811
Sros_3173
KEGG: bha:BH0027 oligopeptide ABC transporter ATP- binding protein; Belongs to the ABC transporter superfamily.
       0.773
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.582
Sros_3175
KEGG: bbr:BB4084 GntR family transcriptional regulator.
 
     0.565
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.