STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3208Hypothetical protein. (197 aa)    
Predicted Functional Partners:
Sros_3207
Putative transcriptional regulator, MerR family; KEGG: pfl:PFL_4160 redox-sensitive transcriptional activator SoxR.
       0.746
Sros_3209
KEGG: sfu:Sfum_4035 hypothetical protein.
       0.689
Sros_3243
Hypothetical protein.
 
     0.441
Sros_3715
Hypothetical protein; KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein.
  
     0.418
Sros_3210
KEGG: hch:HCH_05561 hypothetical protein.
       0.411
Sros_5635
KEGG: abo:ABO_1927 hypothetical protein.
 
     0.411
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.