STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3241Heme oxygenase; KEGG: MGC80397 protein; K00510 heme oxygenase. (217 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.928
Sros_4869
Putative multicopper oxidase-like protein; KEGG: bha:BH2082 hypothetical protein.
    
 0.911
Sros_1332
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.904
Sros_5724
KEGG: ppg:PputGB1_4913 ferritin Dps family protein.
     
 0.904
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
 0.904
Sros_4255
KEGG: sus:Acid_7329 radical SAM domain-containing protein.
     
  0.900
Sros_5600
Hypothetical protein.
     
  0.900
Sros_7957
KEGG: cak:Caul_2456 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
     
  0.900
Sros_0917
KEGG: scl:sce4194 hypothetical protein.
   
 0.871
Sros_3240
KEGG: ank:AnaeK_3256 transcriptional regulator, TetR family.
 
     0.807
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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