STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3252KEGG: scl:sce5432 putative two-component system sensor kinase. (372 aa)    
Predicted Functional Partners:
Sros_3251
KEGG: scl:sce5431 two-component system response regulator.
   0.921
Sros_2507
Signal transduction histidine kinase-like protein; KEGG: bmb:BruAb1_0367 sensor histidine kinase.
  
     0.709
Sros_1746
KEGG: scl:sce5431 two-component system response regulator.
   0.689
Sros_7301
KEGG: scl:sce5431 two-component system response regulator.
   0.674
Sros_6198
KEGG: bph:Bphy_7760 integral membrane sensor signal transduction histidine kinase.
  
     0.647
Sros_4115
KEGG: scl:sce5431 two-component system response regulator.
   0.638
Sros_6432
KEGG: sus:Acid_1273 integral membrane sensor signal transduction histidine kinase.
  
     0.613
Sros_5619
KEGG: scl:sce5431 two-component system response regulator.
   0.593
Sros_0199
KEGG: scl:sce5431 two-component system response regulator.
   0.566
Sros_4577
KEGG: scl:sce5431 two-component system response regulator.
   0.557
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.