STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3323Beta-galactosidase; KEGG: glycosyl hydrolase, family 2; Belongs to the glycosyl hydrolase 2 family. (584 aa)    
Predicted Functional Partners:
Sros_3322
Hypothetical protein; KEGG: mlo:mll8382 multi-drug resistance efflux pump.
 
  
 0.960
Sros_5744
KEGG: pap:PSPA7_4664 hypothetical protein.
 
     0.790
Sros_9232
KEGG: pap:PSPA7_4664 hypothetical protein.
     0.768
Sros_1503
KEGG: mpo:Mpop_2993 aldose 1-epimerase.
  
 0.732
Sros_1164
KEGG: pag:PLES_14721 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.686
Sros_8237
alpha-L-rhamnosidase; KEGG: ccs:CCNA_01029 alpha-L-rhamnosidase.
 
 
 0.616
Sros_2447
KEGG: xca:xccb100_1768 putative xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.604
Sros_4893
Hypothetical protein; KEGG: rle:pRL100260 putative alfa-L-rhamnosidase.
 
 
 0.603
Sros_6551
KEGG: sus:Acid_5559 alpha-L-rhamnosidase.
 
 
 0.601
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.550
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.