STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3332KEGG: bha:BH1939 proline dehydrogenase. (323 aa)    
Predicted Functional Partners:
Sros_3096
KEGG: afw:Anae109_0887 delta-1-pyrroline-5- carboxylate dehydrogenase.
 
 0.966
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.954
Sros_3097
KEGG: baa:BA_0116 proline dehydrogenase.
  
  
 
0.922
Sros_3503
KEGG: bar:GBAA2834 proline racemase, putative; Belongs to the proline racemase family.
    
 0.907
Sros_5997
KEGG: slo:Shew_2361 proline racemase; Belongs to the proline racemase family.
    
 0.907
Sros_6004
4-hydroxyproline epimerase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha-ketoglutarate. Displays no proline racemase activity.
    
 0.907
Sros_3171
KEGG: scl:sce0097 proline iminopeptidase.
     
  0.900
Sros_8864
Prolyl aminopeptidase; KEGG: rle:RL2538 putative proline iminopeptidase; Belongs to the peptidase S33 family.
     
  0.900
Sros_3971
KEGG: avi:Avi_5820 monocarboxylic acid permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.820
Sros_1252
KEGG: aca:ACP_1789 citrate synthase 2; Belongs to the citrate synthase family.
  
  
 0.585
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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