STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3372Glucokinase; KEGG: sde:Sde_1018 glucokinase; Belongs to the bacterial glucokinase family. (318 aa)    
Predicted Functional Partners:
Sros_3371
KEGG: avi:Avi_3816 keto-hydroxyglutarate- aldolase/keto-deoxy-phosphogluconate aldolase.
 
 
 0.989
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 0.972
Sros_1389
Mannose-6-phosphate isomerase; KEGG: tmz:Tmz1t_0879 KpsF/GutQ family protein.
    
 0.925
Sros_6015
KEGG: sfu:Sfum_1952 phosphoglucose isomerase (PGI); Belongs to the GPI family.
    
 0.925
zwf-2
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.922
Sros_5639
KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
    
 0.920
Sros_5684
Putative transcriptional regulator, RpiR family; KEGG: pmu:PM1714 hypothetical protein.
    
 0.917
Sros_1503
KEGG: mpo:Mpop_2993 aldose 1-epimerase.
    
 0.913
Sros_3303
KEGG: eum:ECUMN_4406 putative aldose-1-epimerase.
    
 0.913
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.913
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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