STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3406Putative transcriptional regulator, TetR family; KEGG: scl:sce1231 putative HTH-type transcriptional regulator betl 5'region. (222 aa)    
Predicted Functional Partners:
Sros_5092
KEGG: scl:sce6308 TetR family transcriptional regulator.
  
     0.751
Sros_3408
KEGG: bpd:BURPS668_2056 ABC-2 type transporter, permease protein.
 
     0.617
Sros_3405
Hypothetical protein.
       0.576
Sros_3407
KEGG: sus:Acid_0602 ABC transporter related.
       0.553
Sros_7234
KEGG: rle:RL1054 TetR family transcriptional regulator.
  
     0.430
Sros_1945
KEGG: scl:sce7023 TetR family transcriptional regulator.
  
     0.426
Sros_4870
KEGG: bur:Bcep18194_C6857 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
 
   0.405
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.