STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3506Hypothetical protein. (259 aa)    
Predicted Functional Partners:
Sros_3505
KEGG: btr:Btr_1447 hypothetical protein.
       0.732
Sros_3503
KEGG: bar:GBAA2834 proline racemase, putative; Belongs to the proline racemase family.
       0.668
Sros_3504
KEGG: saz:Sama_2693 PhzF family phenazine biosynthesis protein.
       0.668
Sros_3502
KEGG: sme:SMc03253 putative L-proline 3-hydroxylase protein.
       0.594
Sros_3507
KEGG: ade:Adeh_4255 major facilitator transporter.
       0.544
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.