STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3670Signal transduction histidine kinase-like protein; KEGG: scl:sce5432 putative two-component system sensor kinase. (371 aa)    
Predicted Functional Partners:
Sros_3669
KEGG: scl:sce5431 two-component system response regulator.
 
   0.878
Sros_8145
KEGG: sus:Acid_1273 integral membrane sensor signal transduction histidine kinase.
  
     0.721
Sros_9331
Signal transduction histidine kinase-like protein; KEGG: acp:A2cp1_2171 histidine kinase.
  
     0.656
Sros_1652
Histidine kinase; KEGG: mmr:Mmar10_2544 putative signal transduction histidine kinase.
  
     0.641
Sros_2507
Signal transduction histidine kinase-like protein; KEGG: bmb:BruAb1_0367 sensor histidine kinase.
  
     0.637
Sros_3671
Hypothetical protein.
       0.610
Sros_1935
Histidine kinase; KEGG: reh:H16_A1985 signal transduction histidine kinase containing PAS/PAC sensor domain.
  
     0.608
Sros_0555
KEGG: tmz:Tmz1t_0179 integral membrane sensor signal transduction histidine kinase.
  
     0.564
Sros_6432
KEGG: sus:Acid_1273 integral membrane sensor signal transduction histidine kinase.
  
     0.554
Sros_7438
Signal transduction histidine kinase-like protein; KEGG: ccs:CCNA_01207 two-component sensor histidine kinase.
  
     0.552
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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