STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3695KEGG: pla:Plav_2389 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Sros_4642
Hypothetical protein; KEGG: mxa:MXAN_1686 acetyltransferase, GNAT family.
  
    0.732
Sros_3696
KEGG: afw:Anae109_3251 deaminase-reductase domain- containing protein.
  
    0.613
Sros_3694
KEGG: baa:BA_0741 abhydrolase, alpha/beta hydrolase fold.
 
    0.598
Sros_0452
KEGG: bpy:Bphyt_3694 helix-turn-helix type 11 domain protein.
  
     0.535
Sros_0201
Hypothetical protein; KEGG: reh:H16_A2625 ABC-type transporter, permease component: HAAT family.
  
     0.485
Sros_4441
KEGG: eba:c2A200 hypothetical protein.
  
 
   0.448
Sros_6304
Hypothetical protein; KEGG: bpy:Bphyt_6200 major facilitator superfamily MFS_1.
  
     0.427
Sros_5378
KEGG: bvi:Bcep1808_3633 aminoglycoside/hydroxyurea antibiotic resistance kinase.
  
     0.426
Sros_5794
KEGG: xcb:XC_4140 hypothetical protein.
 
    0.423
Sros_3697
KEGG: bpe:BP2857 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.422
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.