STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3705KEGG: bar:GBAA5513 hypothetical protein. (557 aa)    
Predicted Functional Partners:
Sros_2350
KEGG: xac:XAC3368 hypothetical protein.
  
     0.768
Sros_8441
Hypothetical protein; KEGG: pen:PSEEN0303 RNA polymerase factor sigma-32.
  
     0.768
Sros_8401
KEGG: hypothetical protein LOC739882.
  
     0.767
Sros_8182
KEGG: bja:blr0521 hypothetical protein.
  
     0.761
Sros_9326
Putative transcriptional regulator, XRE family; KEGG: ank:AnaeK_0453 MJ0042 family finger-like protein.
  
     0.758
Sros_7139
KEGG: TP23; basic proline-rich protein.
  
     0.750
Sros_0545
Hypothetical protein; KEGG: GK17443 gene product from transcript GK17443- RA.
  
     0.746
Sros_1635
Hypothetical protein; KEGG: ppg:PputGB1_1389 methyltransferase type 12.
 
     0.745
Sros_6403
Hypothetical protein; KEGG: GF21951 gene product from transcript GF21951- RA.
  
     0.743
Sros_8296
KEGG: msl:Msil_1350 hypothetical protein.
  
     0.737
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.