STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3721KEGG: vvy:VVA0123 transcriptional regulator. (350 aa)    
Predicted Functional Partners:
Sros_2949
KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
    
 
 0.867
Sros_7173
KEGG: bha:BH1924 sugar transport system (sugar- binding protein).
 
   
 0.712
Sros_3720
Putative transcriptional regulator, XRE family; KEGG: rle:RL4049 hypothetical protein.
       0.693
Sros_2252
Transcriptional regulators-like protein; KEGG: bsu:BSU33970 LacI family transcription regulator.
  
     0.685
Sros_0938
KEGG: kpn:KPN_00344 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.672
Sros_3328
KEGG: eck:EC55989_0412 maltodextrin glucosidase.
  
  
 0.672
Sros_0943
KEGG: mxa:MXAN_2156 putative serine/threonine protein kinase.
      
 0.660
Sros_3722
KEGG: scl:sce6897 hypothetical protein.
       0.547
Sros_4888
KEGG: ret:RHE_PC00041 LacI family transcription regulator.
  
   
0.472
Sros_6831
KEGG: aav:Aave_4199 LacI family transcription regulator.
  
   
0.466
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.