STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3750KEGG: ade:Adeh_2212 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
Sros_9290
KEGG: rle:RL2799 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.764
Sros_1507
KEGG: rlt:Rleg2_1625 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.746
Sros_3749
KEGG: nmu:Nmul_A2263 endoribonuclease L-PSP.
 
     0.626
Sros_3751
KEGG: rpa:RPA3290 TetR family transcriptional regulator.
  
   0.555
Sros_6954
KEGG: mxa:MXAN_5480 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.427
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.