STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3755Hypothetical protein; KEGG: eta:ETA_28190 clavaminate synthase 1. (323 aa)    
Predicted Functional Partners:
Sros_3754
KEGG: mno:Mnod_3998 ornithine cyclodeaminase/mu- crystallin.
 
    0.909
Sros_3753
KEGG: hch:HCH_03695 diaminopimelate decarboxylase.
 
     0.851
Sros_3752
KEGG: bbt:BBta_0633 putative cysteine synthase (O- acetylserine sulfhydrylase) (O-acetylserine (thiol)-lyase) (CSase).
 
   
 0.827
Sros_3756
KEGG: rec:RHECIAT_PC0000775 putative peptide ABC transporter, substrate-binding protein.
 
     0.559
Sros_7618
KEGG: bja:bll0083 hypothetical protein.
  
     0.509
Sros_5077
Hypothetical protein.
  
     0.485
Sros_5076
KEGG: aba:Acid345_1399 hypothetical protein.
  
     0.481
Sros_2186
KEGG: mxa:MXAN_4525 non-ribosomal peptide synthase MxaA.
  
  
 0.480
Sros_7598
KEGG: bur:Bcep18194_B1559 hypothetical protein.
  
     0.475
Sros_3757
KEGG: bac:BamMC406_6058 binding-protein-dependent transport systems inner membrane component.
       0.452
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.