STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3762KEGG: ccs:CCNA_03047 4-amino-4-deoxychorismate lyase. (285 aa)    
Predicted Functional Partners:
Sros_3761
KEGG: oca:OCAR_5217 para-aminobenzoate synthase.
  
 0.875
Sros_3763
KEGG: bxe:Bxe_A1419 benzoate-coenzyme A ligase.
  
 
 0.694
Sros_3765
Conserved hypothetical protein; KEGG: cvi:CV_2659 phenylacetic acid degradation protein PaaA.
 
     0.679
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.616
ilvD
KEGG: nmn:NMCC_1068 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.616
Sros_3764
KEGG: acr:Acry_3179 hypothetical protein.
       0.612
Sros_4655
KEGG: scl:sce9122 putative binding-protein- dependent transport protein.
  
  
 0.525
Sros_8058
KEGG: gur:Gura_3719 acetolactate synthase 3 regulatory subunit.
  
 
 0.502
Sros_0218
KEGG: vfm:VFMJ11_A0700 spermine/spermidine acetyltransferase.
  
 
   0.499
Sros_2949
KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
  
  
 0.499
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.