STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3763KEGG: bxe:Bxe_A1419 benzoate-coenzyme A ligase. (522 aa)    
Predicted Functional Partners:
Sros_6835
KEGG: ppf:Pput_1675 amino acid adenylation domain- containing protein.
 
   
0.908
Sros_4286
KEGG: mxa:MXAN_4528 polyketide synthase.
 
 
 0.896
Sros_6836
KEGG: mxa:MXAN_3635 non-ribosomal peptide synthase/polyketide synthase.
 
    
 0.890
Sros_8830
KEGG: mxa:MXAN_4405 peptide synthetase.
 
 0.885
Sros_2423
KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase.
 
 
 0.863
Sros_9272
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein; KEGG: dar:Daro_2822 AMP-dependent synthetase and ligase.
 
 
 0.851
Sros_3765
Conserved hypothetical protein; KEGG: cvi:CV_2659 phenylacetic acid degradation protein PaaA.
 
   
 0.838
Sros_6561
KEGG: bpl:BURPS1106A_A1714 AMP-binding domain- containing protein.
 
0.776
Sros_3764
KEGG: acr:Acry_3179 hypothetical protein.
       0.773
Sros_8815
Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase.
 
 
 0.746
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.