STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3869Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: psa:PST_0358 two-component sensor kinase. (540 aa)    
Predicted Functional Partners:
Sros_3868
KEGG: ppr:PBPRA2762 putative response regulator ofcitrate/malate metabolism.
 
 0.984
Sros_8064
KEGG: vvy:VV1604 response regulator of citrate/malate metabolism.
 
 0.904
Sros_3870
KEGG: met:M446_4772 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.888
Sros_7300
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: sus:Acid_6601 serine phosphatase.
      0.575
Sros_2362
KEGG: hypothetical protein.
  
 
 0.567
Sros_3867
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein; KEGG: sfu:Sfum_2451 anti-sigma-factor antagonist.
       0.556
Sros_5852
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein.
      0.533
Sros_0383
KEGG: hypothetical protein.
  
 
 0.524
Sros_3080
KEGG: hypothetical protein.
  
 
 0.524
Sros_1009
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: sfu:Sfum_2453 serine phosphatase.
 
  
 0.444
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.