STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3913KEGG: hypothetical protein. (175 aa)    
Predicted Functional Partners:
Sros_3909
Hypothetical protein; KEGG: acp:A2cp1_3222 acyl-CoA dehydrogenase domain protein.
       0.796
Sros_3910
Hypothetical protein.
       0.779
Sros_3911
KEGG: bha:BH0604 methanol dehydrogenase regulatory protein.
       0.773
Sros_3912
KEGG: psa:PST_1154 hypothetical protein.
       0.773
Sros_3908
Xaa-Pro dipeptidyl-peptidase; KEGG: bar:GBAA2860 x-prolyl-dipeptidyl aminopeptidase.
       0.515
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.