STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4119KEGG: aca:ACP_1470 threonine dehydratase catabolic. (319 aa)    
Predicted Functional Partners:
Sros_8058
KEGG: gur:Gura_3719 acetolactate synthase 3 regulatory subunit.
  
 
 0.969
Sros_8042
KEGG: sfu:Sfum_3031 isocitrate/isopropylmalate dehydrogenase.
 
 
 0.952
Sros_8059
KEGG: ade:Adeh_1978 acetolactate synthase, large subunit.
 
 0.948
Sros_1649
L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
 
 
0.947
Sros_4372
KEGG: mrd:Mrad2831_1541 pyridoxal-5'-phosphate- dependent protein beta subunit.
 
 
0.945
Sros_1754
KEGG: mms:mma_3335 L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
 
 0.939
Sros_8913
KEGG: aca:ACP_3389 threonine synthase.
  
 
 0.939
Sros_3052
KEGG: vei:Veis_4212 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
 0.937
Sros_8313
KEGG: scl:sce8127 putative acetolactate synthase; Belongs to the TPP enzyme family.
  
 0.937
Sros_8566
KEGG: scl:sce0438 cystathionine beta-synthase.
 
 
0.927
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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