STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4130Hypothetical protein. (224 aa)    
Predicted Functional Partners:
Sros_0630
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.793
Sros_8590
Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein; KEGG: lch:Lcho_2366 chain length determinant protein EpsF.
  
 
 0.531
Sros_8936
ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein; KEGG: bsu:BSU35700 teichoic acids export protein ATP-binding subunit.
  
  
 0.499
Sros_4131
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: rpb:RPB_4411 luciferase-like.
       0.435
Sros_4129
KEGG: scl:sce7040 hypothetical protein.
       0.421
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.