STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4152KEGG: scl:sce2528 hypothetical protein. (86 aa)    
Predicted Functional Partners:
Sros_4150
KEGG: afr:AFE_1910 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.985
Sros_4151
KEGG: ade:Adeh_2746 3-oxoacyl-[acyl-carrier- protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.985
Sros_7054
KEGG: bmn:BMA10247_1801 malonyl CoA-acyl carrier protein transacylase.
  
 0.892
Sros_0588
NADH:ubiquinone oxidoreductase 24 kD subunit- like protein; KEGG: aca:ACP_0292 NADH dehydrogenase I, E subunit.
  
 0.847
rplU
50S ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.839
Sros_4148
Hypothetical protein.
       0.821
Sros_1299
KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.
  
 
 0.818
Sros_3798
KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.
  
 
 0.818
Sros_6358
KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.
  
 
 0.818
Sros_6412
KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.
  
 
 0.818
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.