STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4170KEGG: gsu:GSU0217 nitroreductase family protein. (199 aa)    
Predicted Functional Partners:
Sros_3585
KEGG: mno:Mnod_1143 NADPH-dependent FMN reductase.
    
 0.918
Sros_2129
KEGG: xac:XAC1253 bifunctional riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
    
 0.910
Sros_8273
KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein.
    
 0.903
Sros_4169
Asparagine synthase (glutamine-hydrolyzing); KEGG: scl:sce4939 hypothetical protein.
       0.709
Sros_4171
KEGG: pzu:PHZ_c1845 NADPH-dependent glutamate synthase beta chain.
  
    0.605
Sros_4168
KEGG: bha:BH2357 ferredoxin [4Fe-4S].
     
 0.530
Sros_2949
KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
     
 0.493
Sros_5193
KEGG: pfo:Pfl01_3627 hypothetical protein.
  
  
 0.473
Sros_6320
KEGG: yen:YE1150 hypothetical protein.
  
  
 0.473
Sros_4568
KEGG: cytosine/adenosine deaminases.
 
    0.464
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.