STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4232KEGG: ppg:PputGB1_1806 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (347 aa)    
Predicted Functional Partners:
Sros_4231
KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.871
Sros_4230
KEGG: pde:Pden_3522 periplasmic binding protein.
 
  
 0.846
Sros_3465
KEGG: rsk:RSKD131_3579 ABC transporter related.
  
 0.839
Sros_3068
KEGG: cvi:CV_2234 enterobactin-iron transport system ATP-binding protein.
  
 0.838
Sros_5111
KEGG: dac:Daci_3149 ABC transporter related.
  
 0.838
Sros_7988
KEGG: rsh:Rsph17029_3058 ABC transporter related.
  
 0.838
Sros_5060
KEGG: pmy:Pmen_4566 ABC transporter related.
  
 0.837
Sros_2524
KEGG: rsk:RSKD131_3579 ABC transporter related.
  
 0.835
Sros_0853
KEGG: sme:SMa1746 ABC transporter, periplasmic solute-binding protein.
 
  
 0.688
Sros_2522
KEGG: dac:Daci_3729 periplasmic binding protein.
 
  
 0.643
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.