STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4307KEGG: aba:Acid345_4576 daunorubicin resistance ABC transporter ATPase subunit. (330 aa)    
Predicted Functional Partners:
Sros_4308
Hypothetical protein; KEGG: afr:AFE_1603 ABC transporter, permease protein, putative.
 
    0.872
Sros_4309
Hypothetical protein; KEGG: smt:Smal_0256 ABC-2 type transporter.
 
    0.833
Sros_3483
KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein.
 
    0.722
Sros_3408
KEGG: bpd:BURPS668_2056 ABC-2 type transporter, permease protein.
 
    0.668
Sros_6787
KEGG: aeh:Mlg_2716 ABC-2 type transporter.
  
 0.631
Sros_1775
KEGG: afw:Anae109_0945 ABC transporter related.
 
    0.623
cysS-2
Cysteine--tRNA ligase; KEGG: bur:Bcep18194_B0590 cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.595
Sros_4183
KEGG: aeh:Mlg_2716 ABC-2 type transporter.
  
 0.592
Sros_5457
KEGG: eta:ETA_08180 cobalt import ATP-binding protein CbiO.
 
   
0.569
Sros_8158
KEGG: aeh:Mlg_2716 ABC-2 type transporter.
  
 0.547
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.