STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4342Cytochrome P450-like protein; KEGG: mex:Mext_0777 cytochrome P450. (412 aa)    
Predicted Functional Partners:
Sros_8815
Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase.
 
 0.945
Sros_3767
KEGG: pfl:PFL_3492 pyochelin synthetase F.
  
 
 0.926
Sros_6556
KEGG: bsu:BSU31960 involved in siderophore 2,3- dihydroxybenzoate (DHB) synthesis.
  
 
 0.873
Sros_2421
KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
  
 0.630
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.630
Sros_5582
KEGG: gdi:GDI2833 putative nonribosomal peptide synthetases (NPRS).
  
 0.630
Sros_6838
Non-ribosomal peptide synthetase modules and related protein-like protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
  
 0.630
Sros_6987
KEGG: bja:bll6537 putative cytochrome P450.
  
     0.603
Sros_9048
KEGG: scl:sce7167 hypothetical protein; Belongs to the cytochrome P450 family.
  
     0.562
Sros_2423
KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase.
 
 0.539
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.