STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4481Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: aca:ACP_1964 regulator of sigma-B activity, putative. (549 aa)    
Predicted Functional Partners:
Sros_4482
KEGG: rpe:RPE_1486 cobalamin B12-binding domain protein.
     0.970
Sros_4483
KEGG: pca:Pcar_1874 anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.905
Sros_0494
KEGG: dat:HRM2_43530 putative anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.822
Sros_0135
KEGG: sat:SYN_02356 anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.799
Sros_7537
Hypothetical protein; KEGG: glo:Glov_0751 anti-sigma-factor antagonist.
 
 
 0.741
Sros_7890
KEGG: sus:Acid_0107 anti-sigma-factor antagonist.
 
 
 0.698
Sros_6797
KEGG: sus:Acid_2843 anti-sigma-factor antagonist.
 
 
 0.697
Sros_3929
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: baa:BA_1559 HATPase_c, Histidine kinase-, DNA gyrase B-, phytochrome-like ATPase.
 
 
 0.696
Sros_0996
KEGG: mag:amb0333 anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.689
Sros_0067
KEGG: mca:MCA1431 anti-anti-sigma factor family protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.688
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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