STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4587KEGG: aca:ACP_3147 protease, CAAX amino terminal family. (240 aa)    
Predicted Functional Partners:
Sros_4588
KEGG: gdj:Gdia_0204 transcriptional regulator, PadR- like family.
  
    0.739
Sros_1686
Hypothetical protein; KEGG: sus:Acid_0080 ABC-2 type transporter.
  
    0.582
Sros_4586
Hypothetical protein.
       0.546
Sros_6403
Hypothetical protein; KEGG: GF21951 gene product from transcript GF21951- RA.
  
   
 0.517
Sros_7157
KEGG: ilo:IL0311 ABC-type multidrug transport system, permease component.
  
    0.510
Sros_5193
KEGG: pfo:Pfl01_3627 hypothetical protein.
  
  
 0.509
Sros_6320
KEGG: yen:YE1150 hypothetical protein.
  
  
 0.509
Sros_3920
KEGG: hypothetical protein.
  
     0.456
Sros_9097
Hypothetical protein; KEGG: proteophosphoglycan 5.
 
     0.449
Sros_7664
KEGG: hypothetical protein.
  
     0.448
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.