STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4591Putative transcriptional regulator, AsnC family; KEGG: bav:BAV1824 transcriptional regulator. (346 aa)    
Predicted Functional Partners:
Sros_4880
KEGG: bte:BTH_I2523 hypothetical protein.
 
     0.694
Sros_6626
Putative translation initiation inhibitor yjgF family-like protein; KEGG: bbr:BB1760 hypothetical protein.
  
     0.641
Sros_4590
KEGG: bxe:Bxe_A3003 aspartate racemase; Belongs to the aspartate/glutamate racemases family.
 
     0.632
Sros_4883
KEGG: bha:BH3690 sugar transport system (sugar- binding protein).
  
     0.624
Sros_4889
ABC-type sugar transport system periplasmic component-like protein; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1.
  
     0.619
Sros_5559
KEGG: sme:SM_b20157 ABC transporter periplasmic substrate-binding protein.
  
     0.618
Sros_4887
KEGG: bte:BTH_I2523 hypothetical protein.
 
     0.613
Sros_4884
KEGG: pmy:Pmen_4204 hypothetical protein.
  
     0.590
Sros_4691
KEGG: sus:Acid_6269 hypothetical protein.
  
     0.582
Sros_4892
Beta-lactamase class C and other penicillin binding protein-like protein; KEGG: sus:Acid_2510 beta-lactamase.
  
     0.561
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.