STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4603KEGG: bar:GBAA5454 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
Sros_5039
KEGG: bcm:Bcenmc03_5656 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
Sros_4317
KEGG: dvm:DvMF_0511 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.771
Sros_7048
KEGG: mxa:MXAN_5480 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.768
Sros_5906
KEGG: sml:Smlt1678 putative transcriptional regulator-LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.766
Sros_4593
KEGG: aav:Aave_0303 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.745
Sros_6399
KEGG: acr:Acry_2159 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.737
Sros_4649
KEGG: cvi:CV_0218 transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.699
Sros_4604
KEGG: pca:Pcar_3091 cytochrome d ubiquinol oxidase subunit I.
       0.553
Sros_4605
KEGG: xac:XAC2337 cytochrome d ubiquinol oxidase subunit II.
       0.545
Sros_4617
KEGG: bpy:Bphyt_6041 transcriptional regulator, AraC family.
  
    0.490
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.