Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sros_4635KEGG: bvi:Bcep1808_5021 putative transposase. (363 aa)    
Predicted Functional Partners:
Sros_0240
Hypothetical protein; KEGG: met:M446_5589 putative transposase.
  
     0.774
Sros_4634
Transcriptional regulators-like protein; KEGG: dvm:DvMF_1558 transcriptional regulator, MarR family.
       0.631
Sros_0719
KEGG: mxa:MXAN_1765 transposase orfA, IS3 family.
 
     0.598
Sros_3719
KEGG: rme:Rmet_4154 transposase, IS4 family.
 
  
 0.556
Sros_4633
KEGG: bha:BH1010 hypothetical protein; Belongs to the WrbA family.
     
 0.477
Sros_4632
KEGG: bpt:Bpet2935 putative transmembrane efflux protein.
       0.419
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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