STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4692Hypothetical protein; KEGG: kpe:KPK_B0078 transposase, IS110 family. (409 aa)    
Predicted Functional Partners:
Sros_3517
KEGG: mno:Mnod_8094 transposase IS4 family protein.
  
     0.513
Sros_3521
KEGG: mno:Mnod_8094 transposase IS4 family protein.
  
     0.513
Sros_4721
KEGG: mno:Mnod_8094 transposase IS4 family protein.
  
     0.513
Sros_5764
KEGG: mno:Mnod_8094 transposase IS4 family protein.
  
     0.513
Sros_9207
KEGG: mno:Mnod_8094 transposase IS4 family protein.
  
     0.513
Sros_5341
KEGG: bha:BH0641 hypothetical protein.
  
     0.505
Sros_6236
Transcriptional modulator of MazE/toxin, MazF; KEGG: abu:Abu_1572 PemK family transcriptional regulator.
  
     0.456
Sros_1929
KEGG: aeh:Mlg_1545 hypothetical protein.
  
     0.426
Sros_6961
KEGG: rpc:RPC_3635 MarR family transcriptional regulator.
  
     0.417
Sros_5282
KEGG: bha:BH0641 hypothetical protein.
  
     0.411
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.