STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4698KEGG: scl:sce6114 hypothetical protein. (152 aa)    
Predicted Functional Partners:
Sros_4701
KEGG: sme:SMc02891 putative oxidoreductase transmembrane protein.
 
     0.559
Sros_4699
KEGG: sus:Acid_2013 X-Pro dipeptidyl-peptidase domain-containing protein.
     
 0.519
Sros_4700
KEGG: mxa:MXAN_0533 NAD dependent epimerase/dehydratase family.
       0.516
Sros_3242
KEGG: cti:RALTA_B2096 hypothetical protein.
  
     0.403
Sros_8175
Hypothetical protein; KEGG: mes:Meso_1533 transcriptional regulator, ArsR family.
  
     0.402
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.