STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4711KEGG: dac:Daci_4820 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
Sros_4712
KEGG: rfr:Rfer_1004 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Sros_4709
KEGG: rpb:RPB_1744 ABC transporter related.
  
 0.967
Sros_4710
KEGG: rpb:RPB_1743 ABC transporter related.
  
 0.963
Sros_7509
KEGG: bov:BOV_A1078 branched chain amino acid ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.956
Sros_6000
KEGG: sat:SYN_00787 branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.932
Sros_4713
KEGG: rpd:RPD_3562 putative leucine/isoleucine/valine-binding protein precursor.
 
  
 0.924
Sros_2958
KEGG: sat:SYN_00787 branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.891
Sros_1981
KEGG: glo:Glov_1864 ABC transporter related.
  
 0.884
Sros_2959
KEGG: cvi:CV_1505 leucine/isoleucine/valine transport system ATP-binding protein.
  
 0.884
Sros_5998
KEGG: bpt:Bpet2650 putative branched-chain amino acid ABC transporter, ATP-binding protein.
  
 0.883
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.