STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4712KEGG: rfr:Rfer_1004 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (348 aa)    
Predicted Functional Partners:
Sros_4711
KEGG: dac:Daci_4820 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Sros_4709
KEGG: rpb:RPB_1744 ABC transporter related.
  
 0.995
Sros_2959
KEGG: cvi:CV_1505 leucine/isoleucine/valine transport system ATP-binding protein.
  
 0.986
Sros_5999
KEGG: acp:A2cp1_4413 ABC transporter related.
  
 0.986
Sros_1981
KEGG: glo:Glov_1864 ABC transporter related.
  
 0.985
Sros_3030
KEGG: pol:Bpro_3842 ABC transporter related.
  
 0.985
Sros_4710
KEGG: rpb:RPB_1743 ABC transporter related.
  
 0.985
Sros_5998
KEGG: bpt:Bpet2650 putative branched-chain amino acid ABC transporter, ATP-binding protein.
  
 0.982
Sros_2960
KEGG: dal:Dalk_3944 ABC transporter related.
  
 0.958
Sros_9108
ABC-type branched-chain amino acid transport systems ATPase component-like protein; KEGG: rle:pRL90261 putative ATP-binding ABC transporter.
  
 0.950
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.