STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4837KEGG: sat:SYN_00043 gluconate kinase. (533 aa)    
Predicted Functional Partners:
Sros_3744
Phosphoribosyltransferase-like protein; KEGG: mno:Mnod_2322 erythromycin esterase.
 
  
 0.921
Sros_8924
Trehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.889
Sros_3923
KEGG: nmu:Nmul_A1780 hypothetical protein.
   
    0.888
Sros_5973
Hypothetical protein.
   
    0.888
Sros_6751
KEGG: bsu:BSU19150 hypothetical protein.
   
    0.888
Sros_3525
KEGG: ajs:Ajs_2162 trehalose 6-phosphate phosphorylase.
  
    0.814
Sros_4811
KEGG: ajs:Ajs_2162 trehalose 6-phosphate phosphorylase.
  
    0.814
Sros_9126
KEGG: bte:BTH_I3160 carboxymethylenebutenolidase.
 
  
 0.801
Sros_3058
KEGG: rce:RC1_1522 carboxymethylenebutenolidase, putative.
 
  
 0.800
Sros_1433
KEGG: hch:HCH_00429 cation transport ATPase.
 
  
 0.797
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.