STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4920KEGG: sus:Acid_4036 spore coat assembly protein- like protein. (544 aa)    
Predicted Functional Partners:
Sros_4918
KEGG: bba:Bd0821 hypothetical protein.
 
     0.959
Sros_4919
KEGG: dat:HRM2_21160 hypothetical protein.
 
     0.959
Sros_3336
Glycosidase-like protein; KEGG: cja:CJA_0006 alpha-amylase, putative, amy13G.
 
     0.659
Sros_4917
Signal transduction histidine kinase-like protein; KEGG: jan:Jann_2288 histidine kinase.
 
     0.609
Sros_2440
KEGG: psa:PST_2112 probable ring-cleaving dioxygenase.
 
    0.608
Sros_4460
Aminopeptidase; KEGG: scl:sce5740 aminopeptidase.
  
     0.551
Sros_4916
KEGG: gsu:GSU0451 DNA-binding response regulator.
       0.528
Sros_5203
KEGG: rde:RD1_3840 hypothetical protein.
  
     0.487
Sros_3333
KEGG: bvi:Bcep1808_4604 hypothetical protein.
  
     0.471
Sros_8552
KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein.
  
     0.461
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.