STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4998Alpha-mannosidase-like protein; KEGG: sfx:S0578 alpha-mannosidase. (1408 aa)    
Predicted Functional Partners:
Sros_4999
KEGG: bha:BH0785 endo-beta-N-acetylglucosaminidase.
 
  
 0.921
Sros_4997
KEGG: bch:Bcen2424_4829 hypothetical protein.
  
    0.916
Sros_0857
KEGG: swd:Swoo_2011 hypothetical protein.
   
   0.860
Sros_4996
KEGG: mlo:mlr7234 glucose kinase.
  
  
 0.812
Sros_5000
Hypothetical protein; KEGG: scl:sce0661 Mannan endo-1,4-beta-mannosidase.
 
   
 0.810
Sros_4995
KEGG: dol:Dole_2015 mannose-6-phosphate isomerase, class I.
     
 0.792
Sros_5880
KEGG: afw:Anae109_2664 hypothetical protein.
  
     0.659
Sros_5002
KEGG: cvi:CV_0262 sugar ABC transporter periplasmic protein.
 
     0.642
Sros_5003
KEGG: cvi:CV_0261 sugar ABC transporter permease protein.
 
     0.573
Sros_5001
KEGG: scl:sce0662 LacI family transcription regulator.
 
    0.572
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.