STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5039KEGG: bcm:Bcenmc03_5656 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
Sros_4520
Transcriptional regulator-like protein; KEGG: bmj:BMULJ_05281 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.774
Sros_4603
KEGG: bar:GBAA5454 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
Sros_8423
Transcriptional regulator-like protein; KEGG: ses:SARI_01491 hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.772
Sros_2453
KEGG: bid:Bind_2980 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
Sros_5906
KEGG: sml:Smlt1678 putative transcriptional regulator-LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.765
Sros_0846
KEGG: bpe:BP2857 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.762
Sros_2019
KEGG: bac:BamMC406_4411 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.762
Sros_4573
Transcriptional regulator-like protein; KEGG: mxa:MXAN_5480 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.759
Sros_6373
Transcriptional regulator-like protein; KEGG: bpe:BP2857 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.754
Sros_7048
KEGG: mxa:MXAN_5480 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.752
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.