STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5158Dehydrogenase (flavoprotein)-like protein; KEGG: tbd:Tbd_2332 2-octaprenyl-3-methyl-6-methoxy- 1,4-benzoquinol hydroxylase. (671 aa)    
Predicted Functional Partners:
Sros_3828
Phytoene synthase; KEGG: sus:Acid_1266 farnesyl-diphosphate farnesyltransferase.
  
 
 0.839
Sros_5159
KEGG: dvu:DVU3179 octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.709
Sros_2949
KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
  
  
 0.682
Sros_5160
KEGG: dat:HRM2_43210 hypothetical protein.
  
    0.659
Sros_5161
Hypothetical protein; KEGG: bpy:Bphyt_4458 putative membrane glycoprotein.
       0.655
Sros_8114
KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit.
  
 
 0.640
Sros_5885
KEGG: rso:RS03742 chelatase protein.
  
  
 0.624
Sros_5591
Cobaltochelatase; KEGG: pau:PA14_25970 cobaltochelatase.
  
  
 0.620
rnj
Conserved hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
    0.568
Sros_6208
KEGG: acp:A2cp1_0419 monooxygenase FAD-binding.
 
 
 0.554
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.