STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5246KEGG: mxa:MXAN_6210 hypothetical protein. (366 aa)    
Predicted Functional Partners:
Sros_5245
Hypothetical protein.
 
     0.849
Sros_5244
KEGG: scl:sce5223 DeoR family transcriptional regulator.
 
     0.615
Sros_2000
KEGG: mxa:MXAN_1727 transcriptional regulator, TetR family.
  
     0.520
Sros_4137
Putative transcriptional regulator, TetR family; KEGG: scl:sce6697 putative transcriptional regulator.
  
     0.467
Sros_3544
KEGG: bav:BAV1607 phage excisionase.
  
     0.436
Sros_3985
Hypothetical protein; KEGG: rce:RC1_2580 transcriptional regulator, TetR family protein.
  
     0.417
Sros_5242
Hypothetical protein.
       0.400
Sros_5243
Hypothetical protein.
       0.400
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.