STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5274Hypothetical protein; KEGG: sal:Sala_0898 major facilitator transporter. (477 aa)    
Predicted Functional Partners:
Sros_3691
KEGG: bbr:BB2411 putative transmembrane efflux protein.
  
     0.774
Sros_0748
KEGG: baa:BA_1595 hypothetical protein.
  
     0.765
Sros_3231
KEGG: afw:Anae109_0031 EmrB/QacA family drug resistance transporter; Belongs to the major facilitator superfamily.
  
     0.750
Sros_4513
Hypothetical protein; KEGG: pfo:Pfl01_3277 major facilitator transporter.
  
     0.675
Sros_3734
KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1.
  
     0.641
Sros_1002
Permease, MFS; KEGG: sme:SMa0224 permease, MFS.
  
     0.622
Sros_5275
KEGG: dac:Daci_3578 TetR family transcriptional regulator.
       0.594
Sros_5273
D-aminopeptidase; KEGG: azc:AZC_2991 D-aminopeptidase.
       0.551
Sros_5051
KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1.
  
     0.545
Sros_4933
KEGG: bpt:Bpet3997 transport transmembrane protein.
  
     0.540
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.