STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5311KEGG: azo:azo2983 putative transposase. (415 aa)    
Predicted Functional Partners:
Sros_5310
Hypothetical protein.
       0.709
Sros_5308
KEGG: jan:Jann_2586 binding-protein-dependent transport systems inner membrane component.
       0.526
Sros_5309
KEGG: scl:sce3058 sugar ABC transporter, permease protein.
       0.526
Sros_3719
KEGG: rme:Rmet_4154 transposase, IS4 family.
  
     0.476
Sros_0239
KEGG: pol:Bpro_2745 putative transposase.
  
     0.465
Sros_5033
KEGG: pol:Bpro_2745 putative transposase.
  
     0.465
Sros_6643
KEGG: pol:Bpro_2745 putative transposase.
  
     0.465
Sros_5306
KEGG: sfx:S3475 N-acetylmannosamine kinase.
       0.446
Sros_5307
Beta-mannosidase; KEGG: similar to mannosidase, beta A, lysosomal.
       0.446
Sros_1131
KEGG: dal:Dalk_0113 SMC domain protein.
  
     0.436
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.