STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5357KEGG: bur:Bcep18194_B2548 FAD dependent oxidoreductase. (343 aa)    
Predicted Functional Partners:
Sros_4624
KEGG: rsk:RSKD131_3858 methyltransferase type 12.
 
  
 0.912
Sros_5085
KEGG: rsk:RSKD131_3858 methyltransferase type 12.
 
    0.903
Sros_5358
KEGG: dds:Ddes_2327 transcriptional regulator, XRE family.
 
    0.739
Sros_5356
Hypothetical protein; KEGG: scl:sce2146 putative methyltransferase.
 
  
 0.726
Sros_6566
KEGG: aca:ACP_3043 alkylhydroperoxide reductase C.
  
 
 0.624
Sros_3287
Thioredoxin; KEGG: mxa:MXAN_6848 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.511
Sros_5492
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.485
Sros_8385
KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein.
  
  
 0.485
Sros_5086
Putative transcriptional regulator, XRE family; KEGG: rso:RSc1159 putative transcription regulator protein.
 
    0.409
Sros_8345
KEGG: scl:sce2941 molybdopterin-converting factor chain 2.
  
  
 0.403
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.